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Re: TOUGH3 Installation Fails Due to BLAS Package URL Change
@Tsubasa Sasaki During configuration of TOUGH3, you should be able to see the following output messages. These messages indicate the success of AZTEC installation. The compiled library (libaztec.…
- kenny
- 11 mths ago
- TOUGH3
- Reported - view
Re: TOUGH3 Installation Fails Due to BLAS Package URL Change
@Tsubasa Sasaki Sorry, I sent wrong CMakelists.txt. This is the correct one.
Attachment
- kenny
- 11 mths ago
- TOUGH3
- Reported - view
Re: TOUGH3 Installation Fails Due to BLAS Package URL Change
As I mentioned in previous post that TOUGH3 does not use LAPACK/BLAS directly, you may not need to install them. If you want to make things simple, you can use the attached CMakeLists.…
- kenny
- 11 mths ago
- TOUGH3
- Reported - view
Re: TOUGH3 Installation Fails Due to BLAS Package URL Change
@Tsubasa You may delete the two folders (./build and ./tough3-install) under the working folder and then run the ./configure.sh --build-type=RELEASE --eos=4 --no-x11…
- kenny
- 11 mths ago
- TOUGH3
- Reported - view
Re: TOUGH3 Installation Fails Due to BLAS Package URL Change
Are you using the most updated version of TOUGH3 (V1.12)? The direct usage of BLAS has been removed from TOUGH3 (but it is still be used in PETSC and required during linking).…
- kenny
- 11 mths ago
- TOUGH3
- Reported - view
Re: Mass balance assessment with TOUGH3
@Joseph Elmes Yes, it is necessary to have the duplication of connections across partitioned domain interfaces. During a MPI parallel simulation, these connections are required for both subdomains in…
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: TOUGH3 installation issue
Several critical bugs have been fixed in the TOUGH3 compilation cmake scripts. I do not think it is worth to spend much time on the compilation issue of older version.…
- kenny
- 1 yr ago
- 1
- TOUGH3
- Reported - view
Re: How to debug tough3 correctly
I am pretty sure that your simulation did not go through the breakpoint. Seems you have breakpoint in a function for domain partitioning with Metis. If you do not do the MPI simulation,…
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: TOUGH3 installation issue
@zhigao delete the folder "/esd-tough3/tough3-install" and "/esd-tough3/build", and try again. If it still does not, please post details of the command you used and all output information.
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: TOUGH3 installation issue
@Kenny c and c++ wrap compiler may have different names for different MPI installations. If mpigcc and mpigxx do not work, you may try mpicc and mpicxx
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: TOUGH3 installation issue
@zhigao Seems something wrong with MPI. Make sure that you are using the same version of MPI for both PETSC and TOUGH3 compilation. Please try following for PETSC setup (suppose MPI has already…
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: TOUGH3 installation issue
@zhigao It seems that the PETSC library does not work properly. I would suggest you delete the original PETSC installation, reinstall a newer version and try again.
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: Query on Early Steady State in Methane Discharge Model at 1% Hydraulic Gradient
I do not think any problem for the set up of initial conditions. Adding gas sources should not bring negative pressure or NaN value. I would suggest your do numerical experiments by running the model…
- kenny
- 1 yr ago
- TOUGH2
- Reported - view
Re: Query on Early Steady State in Methane Discharge Model at 1% Hydraulic Gradient
@Jordon Massey You model has reached the maximum number of time steps of 9999. If you want to run more time steps than 9999, you may input MCYC=-20. By the way,…
- kenny
- 1 yr ago
- TOUGH2
- Reported - view
Re: Modify capillary pressure unit by unit
@Luoluo Capillary pressure was calculated cell by cell as a function of liquid saturation when calling to the EOS for updating the fluid thermophysical properties,…
- kenny
- 1 yr ago
- TOUGH2
- Reported - view
Re: Query on Early Steady State in Methane Discharge Model at 1% Hydraulic Gradient
please post the output log file here. There are many reasons that cause the simulation to stop. If it stops (reaches steady) for continually converging on one single time step,…
- kenny
- 1 yr ago
- TOUGH2
- Reported - view
Re: Modify capillary pressure unit by unit
Most people coupling flac3d with TOUGH at each time-step. For such a case, you need to update the capillary pressure at the beginning of each time step in time stepping loop.…
- kenny
- 1 yr ago
- TOUGH2
- Reported - view
Re: How to make a "no flux" grid?
You do not need to set the grids at the top 80 meters as "no flux" grids. If these grids do not have connection to surrounding elements, they are automatically treated as "no flux" to surrounding…
- kenny
- 1 yr ago
- TOUGHREACT
- Reported - view
Re: About the SEED with porosity
@Luoluo It should work, if you are using TOUGH3 (except module ECO2M and TMVOC which requires a slight different input format for including phase state index).
- kenny
- 1 yr ago
- TOUGH2
- Reported - view
Re: Mass balance assessment with TOUGH3
If you are using MPI for the simulation, the flux for a connection crossing two subdomains (model subdomains handled in different CPUs) may be printed twice.…
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: NUMBER OF ELEMENTS SPECIFIED IN DATA BLOCK "ELEME" EXCEEDS ALLOWABLE MAXIMUM OF 12000
@Anand Jadhav Both problems you had are array-size problem. You need to increase of corresponding array size through editing T2. You may get information from TOUGH2 user manual for the details of…
- kenny
- 1 yr ago
- 1
- TOUGH2
- Reported - view
Re: possibly bug in viscosity calculation in TOUGH3_EWASG
@Norihiro Watanabe My understanding is that the pressure used for the liquid density calculation is liquid water pressure. COBRI() was designed for both single aqueous phase or two-phase flow.…
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: NUMBER OF ELEMENTS SPECIFIED IN DATA BLOCK "ELEME" EXCEEDS ALLOWABLE MAXIMUM OF 12000
You need to edit the text file T2 (which is one of the files included in the TOUGH2 source code package) by increasing MNEL and MNCON to a number that is enough for your model.…
- kenny
- 1 yr ago
- 1
- TOUGH2
- Reported - view
Re: possibly bug in viscosity calculation in TOUGH3_EWASG
Hi Norihiro, You are absolutely correct. The problem is caused by not updating the DW0 for the case IE(4)=6. This problem can be fixed by insert following two lines into (bold lines) the subroutine…
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: possibly bug in viscosity calculation in TOUGH3_EWASG
Hi Norihiro, Thanks for reporting the potential bug. I am very interested in investigating this problem. If you can provide your input files, it will be a great help. Kenny
- kenny
- 1 yr ago
- TOUGH3
- Reported - view

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