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Re: TOUGH+HYDRATES convergence issue in phase change
The model run pretty long simulation time (7.8 million days). The message " >>>>>>>> CONVERGENCE FAILURE on time step # 17085 with Dt = 1.350000E+07 seconds,…
- kenny
- 1 yr ago
- TOUGH+
- Reported - view
Re: TOUGH+HYDRATES convergence issue in phase change
Could you post the main output file here?
- kenny
- 1 yr ago
- TOUGH+
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
Seems you did not do it correctly for fixing the cmake script. The "-fallow-argument-mismatch" must apply to "GNU" compiler, not "Intel". I am attaching the correct one.…
Attachment
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
The attached one looks good. The problem appeared during zevsreale.f90 compilation, which is compiled with the CMakeLists.txt in esd-tough3/. Have you fixed it?
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
This is the still the same error (data type dismatch) . Are you sure you have correctly fixed the cmake scripts by adding "-fallow-argument-mismatch" in esd-tough3/CMakeLists.…
- kenny
- 1 yr ago
- TOUGH3
- Reported - view
Re: A problem about the direction of the anisotropic permeability
You can set the direction of kz as the Z, but in the new coordinate the "beta" is the cosin value of the angle between vertical and the connection direction,…
- kenny
- 2 yrs ago
- TOUGH2
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
This is a petsc installation problem. This problem was also reported by another user. Why do not you try reliable (a little older) version, such as Ver 3.18.x
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
Delete the arch-t3 folder and recompile the petsc again
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
The output clearly indicates that the PETSC can not be found, either the provided PETSC_DIR and/or PETSC_ARCH are wrong or you did not sucessfully installed the petsc.
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
Have you deleted the "build" folder before the recompilation? Or did you provide the --PETSC_ARCH and --PETSC_DIR parameters at the configure command line?
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
This problem happens when you are using GFORTRAN Ver 10.0 or later version. An easy way to avoid this problem is to use an alternative Fortran Compiler, Intel Fortran or Gfortran V9.x.…
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
Did you get any message (on monitor) when the error occoured at [56%] Building Fortran object src/mpi_interface/CMakeFiles/toughlib_parallel.dir/parallel.f90?
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: error compiling TOUGH3 on Ubuntu : Failed to build TOUGH TPLS
Please post the error message here.
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: call TOUGH in jupyter notebook and PyTOUGH
Should be the same. You can use them.
- kenny
- 2 yrs ago
- 1
- TOUGH3
- Reported - view
Re: call TOUGH in jupyter notebook and PyTOUGH
You need to compile the code with Visual Studio or "make" command under DOS command line. you can find introduction in the readme file in V1.1.
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: call TOUGH in jupyter notebook and PyTOUGH
The system clearly indicated that the executable you used is not a Window application. You mentioned that you can run it under Ubuntu terminal which means the executable is compiled under Linux…
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: zero pore pressure boundary condition
Many fluid properties are calculated from functions of pressure and temperature. These functions are effect only at certain range of pressure. I do not think you can define 0 pressure boundary…
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: TOUGH3 installation issue
Hi, I took a look of the log file. It seems something wrong with MPI installation. Have you installed the MPI (MPICH or OPENMPI)? I would suggest use WSL (Windows Linux Subsystem) to replace the…
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: TOUGH3 installation issue
I just checked. It was there.
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: No error, nothing... Why this file refuses to Run? Tried everything, but it just wont run.
@Brad Castleberry Sorry for late response. I guess the problem was caused by Quicksort. You can avoid the problem by removing the first layer of the mesh (the first 72 gridblocks) to right before…
- kenny
- 2 yrs ago
- TOUGH+
- Reported - view
Re: No error, nothing... Why this file refuses to Run? Tried everything, but it just wont run.
I did a quick tracking and found the problem appeared in the Quicksort subroutine. The Quicksort is for sorting the mesh elements based on their names.…
- kenny
- 2 yrs ago
- TOUGH+
- Reported - view
Re: No error, nothing... Why this file refuses to Run? Tried everything, but it just wont run.
Do you get any error message? I do not understand what you mean by " just wont run".
- kenny
- 2 yrs ago
- TOUGH+
- Reported - view
Re: An error running the "CO2 leakage along a fault" example in toughio tutorial
@Sophia , The sample "r1d" for ECO2M in the distribution package of TOUGH3 is a typical example for co2 leaking through fault. You may take it as a template for your own model.
- kenny
- 2 yrs ago
- TOUGH3
- Reported - view
Re: No error, nothing... Why this file refuses to Run? Tried everything, but it just wont run.
It looks like you did not give the boundary conditions. You need give at least one griblock with first type boundary for the gravity equilibrium initialization.
- kenny
- 2 yrs ago
- TOUGH+
- Reported - view
Re: Heat generation in EOS3
I tried to run your model on my computer. It seems work ok. However, you need: (1) turn off the diffusion, because you did not input diffusion coefficients.…
- kenny
- 2 yrs ago
- TOUGH2
- Reported - view

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